Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARKNAVKDNLEQIQHQSYSELQELLSEANSMLADSA----AFAGDKADSARARIGALLEKANDALGKGGSAVAERSRHAVDATESYIGANPWQTVAITTAVGLLAGFLLGRRS
3EDV Chain:A ((140-199))
LGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKSLLDACESRRVRLVDTGDKFRFFSMVRDLMLWMEDVIRQIEAQEKPRDVSS
General information:
TITO was launched using:
RESULT:
Template:
3EDV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -901 for 244 contacts (-3.7/contact) +
2D Compatibility (PS) -6088 + (NN) -1924 + (LL) 0
1D Compatibility (HY) -1600 + (ID) 800
Total energy: -11313.0 ( -46.36 by residue)
QMean score : 0.808
(partial model without unconserved sides chains):
PDB file :
Tito_3EDV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EDV-query.scw
PDB file :
Tito_Scwrl_3EDV.pdb
: