Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQKRILVTGAGSGFGREVALRLAA---RGHRTIAGVRGAGQAADLREEAGRRGVP---LRVETLDI----TVAADRERAWEWDIDVLLNNAGSAEAGASAEIPLELVRALFETNVFANLELTQGFVRRMVEQKRG-GKVLFVSSIAGLITGPYTGPYCASKHALEAFAEALHAELKPFGIQVGTINPGPYQTGFNDRMM------------ETWKRWYDPQRHFTDHSGVRFPFEQYDPEEMIARMVELAEADEGPFRTLLPQAFVEVVKDEQAQAWQRRL |
| 1DHT Chain:A ((5-264)) | -----VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDM--KRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFY----QYLAHSKQVFREAAQNPEEVAEVFLTALRAPKPTLRYFTTERFLPLLRMRLDDPSGSNY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DHT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104147 for 1925 contacts (-54.1/contact) +
2D Compatibility (PS) -25316 + (NN) -10299 + (LL) 856
1D Compatibility (HY) -21200 + (ID) 3950
Total energy: -164056.0 ( -85.22 by residue)
QMean score : 0.533
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