Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTAESPTIRLERYSERHVEGLTALYNDPAVARQVLQMPYQSVEQRRKRLHDSADDDRLLILVALHQGDVIGSASLEQHPRIRRSHSGSIGMGVAVAWQGKGVGSRLLGELLDIADNWMNLRRVELTVYTDNAPALALYRKFGFETEGEMRDYAVRDGRFVDVYSMARLRRVEGRVGE
2VI7 Chain:A ((7-170))
------TIRLERYSERHVEGLTALYNDPAVARQVLQMPYQSVEQRRKRLHDS-DDDRLLILVALHQGDVIGSASLEQHPRIRRSHSGSIGMGVAVAWQGKGVGSRLLGELLDIADNWMNLRRVELTVYTDNAPALALYRKFGFETEGEMRDYAVRDGRFVDVYSMARLRR-------
General information:
TITO was launched using:
RESULT:
Template:
2VI7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89318 for 1219 contacts (-73.3/contact) +
2D Compatibility (PS) -17437 + (NN) -6699 + (LL) 832
1D Compatibility (HY) -22400 + (ID) 7850
Total energy: -142872.0 ( -117.20 by residue)
QMean score : 0.552
(partial model without unconserved sides chains):
PDB file :
Tito_2VI7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VI7-query.scw
PDB file :
Tito_Scwrl_2VI7.pdb
: