Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSFRKTLLITGASSGFGQALAREALDAGHRVVGTVRSEEARSALEAVAPGQAFGRLLDVTDLAAIEPTVAAIERDIGPLDVLVNSAGYGHEGILEESPLAEMRRQFEVNLFGAVAMIQAVLPYMRRRRRGHILNITSMGGYITMPGIAYYCGSKFALEGVSEALGKEVAGLGIAVTAVAPGSFRTDWAGRSMVRSPRTIADYDALFDPVRQARQEKSGKQPGDPRKAARAMLQAIDAENPPAHLLLGSDALGLVRQKLKALEEEIAAWEEVTRSTDG |
| 3M1A Chain:A ((6-277)) | ----KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQG-----PGDPAKAAAAIRLALDTEKTPLRLALGGDAVDFLTGHLDSVRAELTEWEKVSRGTDF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3M1A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136235 for 2199 contacts (-62.0/contact) +
2D Compatibility (PS) -29827 + (NN) -20060 + (LL) 460
1D Compatibility (HY) -14800 + (ID) 5650
Total energy: -206112.0 ( -93.73 by residue)
QMean score : 0.596
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