Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTSHAFARWNLLLLVASIFAGLVFAPSVDLSALPTPEARKWVLAEVPSVAVDTTVAGKLAGMSWWGRTVDEEREAESKRVSVGVDGVALIKVDWLLRGIVRDEGGIFALVAKSAEGPLRRFAAGATLPG-GERLESITEQGIRFSFSQDGNTQGFERKLYAPLP
2Y4X Chain:A ((102-152))
---------------------------------------------------------------------------------------------FEMVGTLSNAQGTFALV-KGAG-GVHRVRVGDYLGRNDGKVVGISEGKIDVIE------------------
General information:
TITO was launched using:
RESULT:
Template:
2Y4X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37165 for 299 contacts (-124.3/contact) +
2D Compatibility (PS) -5103 + (NN) -1052 + (LL) 8016
1D Compatibility (HY) -3600 + (ID) 700
Total energy: -39604.0 ( -132.45 by residue)
QMean score : 0.694
(partial model without unconserved sides chains):
PDB file :
Tito_2Y4X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Y4X-query.scw
PDB file :
Tito_Scwrl_2Y4X.pdb
: