Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMQSTRKLLAGLALAVSAGLVQAAPEVRIYNWFDYIAPDTLKNFQAQTGIAPKYDVYDSNEVLEAKLLSGHSGYDLVVPSDSFLPNYLKAEVFQPLDKSKLPNWKNLNPALLKVLAGKDPGNRYVMPYMWGTNGIAYNLDKVRAVLGDDAPLDSWDLVFKPENLAKLQQCGVAFLDSPTEVIPEVLHYLGLSPNSHQPEDYRR-AEEHLAKLRPYITYFSSSKFVSDLANGNVCVAIAWSGGAMQAANRAREAKNGIRIEYRIPKEGAAAWFDVLAIPRDAKNVEQAHAFLDYLLRPEVVAPISDYVAYANPNKAADGLISAELRDNPNVYPPEEVQARLYSVEMLPPKLERLRTRTWSKIKTGK
4JDF Chain:A ((7-344))-------------------------LHIYNWTEYIAPDTVANFEKETGIKVVYDVFDSNEVLEGKLMAGSTGFDLVVPSAYFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDDPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWAGSVWQASNRAKEAKNGVNVSFSIPKEGAMAWFDVFAMPADAKNKDEAYQFLNYLLRPDVVAHISDHVFYANANKAATPLVSAEVRENPGIYPPADVRAKLFTQKVQDPKIDRVRTRAWTKVKSG-


General information:
TITO was launched using:
RESULT:

Template: 4JDF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -174752 for 2862 contacts (-61.1/contact) +
2D Compatibility (PS) -36588 + (NN) -24688 + (LL) 2420
1D Compatibility (HY) -39600 + (ID) 10300
Total energy: -283508.0 ( -99.06 by residue)
QMean score : 0.629

(partial model without unconserved sides chains):
PDB file : Tito_4JDF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JDF-query.scw
PDB file : Tito_Scwrl_4JDF.pdb: