Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALVDGFLELERSSGKLEWSAILQKMASDLGFSKILFGLLPKDSQDYENAFIVGNYPAAWREHYDRAGYARVDPTVSHCTQSVLPIFWEPSIYQTRKQHEFFEEASAAGLVYGLTMPLHGARGELGALSLSVEAENRAEANRFMESVLPTLWMLKDYALQSGAGLAFEHPVSKPVVLTSREKEVLQWCAIGKTSWEISVICNCSEANVNFHMGNIRRKFGVTSRRVAAIMAVNLGLITL
3IX8 Chain:C ((2-167))
-ALVDGFLELERSSGKLEWSAILQKMASDLGFSKILFGLLPKDSQDYENAFIVGNYPAAWREHYDRAGYARVDPTVSHCTQSVLPIFWEPSIYQTRKQHEFFEEASAAGLVYGLTMPLHGARGELGALSLSVEAENRAEANRFMESVLPTLWMLKDYALQSGAGLAF------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3IX8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109510 for 1289 contacts (-85.0/contact) +
2D Compatibility (PS) -17687 + (NN) -5241 + (LL) 6076
1D Compatibility (HY) -23600 + (ID) 8300
Total energy: -158262.0 ( -122.78 by residue)
QMean score : 0.641
(partial model without unconserved sides chains):
PDB file :
Tito_3IX8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IX8-query.scw
PDB file :
Tito_Scwrl_3IX8.pdb
: