Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRKIFLACPYSHADAEVVEQRFRACNEVAATIVRAGHVVFSQVSMSHPINLCLAELDRAAIGRLWAPVDAFYMDHLEELIVLDLPGWRDSAGIRREMEFFEAGGQRVSLWSEVEHEFR
1T1J Chain:A ((1-118))
MRKIFLACPYSHADAEVVEQRFRACNEVAATIVRAGHVVFSQVSMSHPINLCLAELDRAAIGRLWAPVDAFYMDHLEELIVLDLPGWRDSAGIRREMEFFEAGGQRVSLWSEVEHEFR
General information:
TITO was launched using:
RESULT:
Template:
1T1J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81737 for 874 contacts (-93.5/contact) +
2D Compatibility (PS) -12304 + (NN) -1260 + (LL) 0
1D Compatibility (HY) -18400 + (ID) 5900
Total energy: -119601.0 ( -136.84 by residue)
QMean score : 0.617
(partial model without unconserved sides chains):
PDB file :
Tito_1T1J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T1J-query.scw
PDB file :
Tito_Scwrl_1T1J.pdb
: