Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKQHAFTREDLLRCSRGELFGPGNAQLPAPNMLMIDRIVHISDVGGKYGKGELVAELDINPDLWFFACHFEGDPVMPGCLGLDAMWQLVGFYLGWQGNPGRGRALGSGEVKFFGQVLPTAKKVTYNIHIKRTINRSLVLAIADGTVSVDGREIYSAEGLRVGLFTSTDSF
4FQ9 Chain:I ((2-172))
MTKQHAFTREDLLRCSRGELFGPGNAQLPAPNMLMIDRIVHISDVGGKYGKGELVAELDINPDLWFFACHFEGDPVMPGCLGLDAMWQLVGFYLGWQGNPGRGRALGSGEVKFFGQVLPTAKKVTYNIHIKRTINRSLVLAIADGTVSVDGREIYSAEGLRVGLFTSTDSF
General information:
TITO was launched using:
RESULT:
Template:
4FQ9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -130763 for 1354 contacts (-96.6/contact) +
2D Compatibility (PS) -18055 + (NN) -8711 + (LL) 0
1D Compatibility (HY) -25600 + (ID) 8550
Total energy: -191679.0 ( -141.56 by residue)
QMean score : 0.603
(partial model without unconserved sides chains):
PDB file :
Tito_4FQ9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FQ9-query.scw
PDB file :
Tito_Scwrl_4FQ9.pdb
: