Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRPVLPLLLSLSLCAPALADWSGPIEQPLWSLPAAPGLSRWLIVHNLSSAAADGLYHVEVLERRQGQQPWQFQRLAAHLALTEQALRASIVAPLKRGGVYPESYQFAYRQWQERQAAGQAPVCRRTVDECLRAPD
2XU8 Chain:C ((1-116))
-------------------DWSGPIEQPLWSLPAAPGLSRWLIVHNLSSAAADGLYHVEVLERRQGQQPWQFQRLAAHLALTEQALRASIVAPLKRGGVYPESYQFAYRQWQERQAAGQAPVCRRTVDECLRAPD
General information:
TITO was launched using:
RESULT:
Template:
2XU8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42739 for 692 contacts (-61.8/contact) +
2D Compatibility (PS) -12791 + (NN) -7981 + (LL) 1744
1D Compatibility (HY) -14400 + (ID) 5800
Total energy: -81967.0 ( -118.45 by residue)
QMean score : 0.509
(partial model without unconserved sides chains):
PDB file :
Tito_2XU8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XU8-query.scw
PDB file :
Tito_Scwrl_2XU8.pdb
: