Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPLARWVPGLDSLLHYRRAWF---RPDVQAGLSVAAIQIPTAIAYAQIAGFPPQVGLYACILPMLIYALIGSSRQLMVGPDAATAAMVAAAITPLAAGDPQRLVDLSMIIAIMVGLFSIVAGLARAGFIASFLSRPILVGYLNGIGLSLLVGQLGKLFGYEAATSGFVAGILALLENLLHIHWPTLILGSLSLLLMVLLPRRFPQLPGALCGVLLASLAAALLGLDRYGVELLGEVPAGLPQLSWPQT--SLEELKSLLRDATGITVVSFCSAMLTARSFAARHGYSINANHEFVALGLANIGAGVSQGFAISGADSRTAVNDMVGGKTQLVGVVAALVIAATLLLLNKPLGWVPMPALGAVLLLAGWGLIDVQALKGFWKLSRFEFSLCLLTTVGV------LSVGVLPGIFVAVSIAVLRLLYYTYRPSDAVLGWMHGIDGQVELAKYPQATTLPGLVIYRFDAPLLFFNA-DYFKQRVLAVVDGSERPNAVLLNAEAMTNLDISGLATLHEVQQILKAQGVHLSLARVTGQTLDLLQRSSMLGEIKPPLVFSSVRSGVSAYRYWLRQQERLAAQAAATSGNA |
| 5DA0 Chain:A ((14-483)) | ----------------QREWFANPRKDVLAGIVVALALIPEAIAFSIIAGVDPQVGLYASFIIALITAFLGGRPGMI---SAATGAM-ALLMTGLV---KDHGIQYLFAATVLTGVLQVVFGWAKLARYLKFVPRSVMVGFVNALAILIFMAQLPQFVGA---------------------NWQMYAMVAAGLAIIYLLPLVFKAMPSALVAIVVLTVVAVVTGADVKTVGDMGTLPTALPHFQFPQVPLTFETLAIIFPVALTLSLVGLLESLLTAQLIDERTDTTSDKNVESRGQGVANIVTGFFGGMAGCAMIGQSMINVTSGGRGRLSTFVAGAFLMVLILALQPLLVQIPMAALVAVMMVVAISTFDWGSLR----FPKGE-TVVMLATVAVTVFTHDLSLGVLIGV-------VLSALFFARKVS--------------QLSQVTPVDEVDGTRTYRVRGQLFFVSTHDFLHQ-----FDFTHPARRVVIDLSDAHFWDGSAVGALDKVMLKFMRQGTSVELRGLNAASATLVERL------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5DA0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -359281 for 3884 contacts (-92.5/contact) +
2D Compatibility (PS) -46939 + (NN) -13759 + (LL) 8996
1D Compatibility (HY) -44800 + (ID) 6800
Total energy: -462583.0 ( -119.10 by residue)
QMean score : 0.356
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