Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQPTPSDTDQQQALEAFLRDGGTLAMLRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAHEALAARAGAMLEAVTARKDRAYESDNA
4JL0 Chain:A ((10-141))
---------------------------LRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAHEALAARAGAMLEAVTARKD--------
General information:
TITO was launched using:
RESULT:
Template:
4JL0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55313 for 1021 contacts (-54.2/contact) +
2D Compatibility (PS) -14735 + (NN) -10371 + (LL) 1788
1D Compatibility (HY) -17200 + (ID) 6600
Total energy: -102431.0 ( -100.32 by residue)
QMean score : 0.596
(partial model without unconserved sides chains):
PDB file :
Tito_4JL0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JL0-query.scw
PDB file :
Tito_Scwrl_4JL0.pdb
: