Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLAELFAVMAPVLFGAGVGYVWVRLGHAYPTEFVSRIVFNIGSPCLILATLAHTRVDLHSFGRMALASALICVCMAALGWAAARLGRQEWQVLVPAYSFPNVGNMGLPVCLYAFGEAGMTLAVAFYLIMSIGNFSLGVFWMSGERSWRSLLGNPILLSVLLALLLMGLDLQLPRWMANTVDLMAGLTIPLMLITLGVSLASIRPRQLGNGFFYGGLRLLLGALVGWSVALALQLPPLAQGVLVVQSSMPVAVFNYLYALRGNRSPDQVASLVLCSTLLSFAFIPLLLTWWLPALR |
| 2QQ4 Chain:A ((40-128)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GDQVEVMVLLEGDTIADIRFQGQGCAISTASASLMTEAVKGKKVAEALELSRKFQA-MVVEGAPPDPTLGDLLALQG---VAKLPARVKCATLAWHALEEALR-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QQ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89646 for 600 contacts (-149.4/contact) +
2D Compatibility (PS) -9007 + (NN) 3437 + (LL) 16780
1D Compatibility (HY) -2800 + (ID) 1350
Total energy: -82586.0 ( -137.64 by residue)
QMean score : 0.110
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