Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKLHTNHGVITLKLDEEKAPETAANFKEYVKSGHYDNTVFHRVINNFMIQGGGFEPGMKQKPTRAPIKNEANNGLTNKVGSIAMARTMDPHSASAQFFINVADNDFLNHTAPTTQGWGYAVFGEVVEGMDVVNKIKGVATTMRSGHQDVPAEDVIIEKAEIVEE
3T1U Chain:A ((2-163))
-IKLQTNHGTITLKLFADKAPETAANFEQYVKDGHYDGTIFHRVIDGFMIQGGGFEPGMKQKSTRAPIKNEANNGLSNKKYTIAMARTPDPHSASAQFFINVKDNAFLDHTAPTAHGWGYAVFGEVVEGTDVVDRIKSVATGSRAGHGDVPVDDVIIEKAEIV--
General information:
TITO was launched using:
RESULT:
Template:
3T1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51861 for 1305 contacts (-39.7/contact) +
2D Compatibility (PS) -17172 + (NN) -8671 + (LL) 416
1D Compatibility (HY) -15600 + (ID) 6450
Total energy: -99338.0 ( -76.12 by residue)
QMean score : 0.590
(partial model without unconserved sides chains):
PDB file :
Tito_3T1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3T1U-query.scw
PDB file :
Tito_Scwrl_3T1U.pdb
: