Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAVFKALWVTEAPHGVYETQVVERDTGDLPAGDVLIRVQYSSLNYKDALSASGNRGVTRKYPHTPGIDAAGVVAESSVAEFAAGDEVIVTGYDLGMNTAGGFGQYIRVPAAWVIKRPQGLSLREAMILGTAGLTAALCVEKLERSGLRPDHGSVLVTGASGGVGSIAVELLAKLGYTVAAATGKLEQAEFLNRLGAKQILDRATVADGVDKPLLKEQWAGAVDTVGGDILFNVVKSLQYGGSVACCGLTAGAGFKASVLPFILRGVNLLGVDSVELPLVVKASMWDKLSLQWKLDNLEEVAREIALEELPGAINQILAGKLVGRVLVNLG |
| 1O8C Chain:B ((42-344)) | ------------------------DESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSEDPRFHAGQEVLLTGWGVGENHWGGLAEQARVKGDWLVAMPQGLDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGASRVLPRDEFAE--SRPLEKQVWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGVDSVMTPPERRAQAWQRLVADLPESFYTQAAKEISLSEAPNFAEAIINNQIQGRTLVKVN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O8C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -213852 for 2792 contacts (-76.6/contact) +
2D Compatibility (PS) -32522 + (NN) -15035 + (LL) 2608
1D Compatibility (HY) -23600 + (ID) 7150
Total energy: -289551.0 ( -103.71 by residue)
QMean score : 0.619
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