Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEAEKTPDNVVILNHDPIVDPLRQGLLLLCRQLGRPLGDAELVDGMPLEHGRLPLHLVARALRRADITAQVTRQPLRRIDRYLLPALLLLDDGRALVLVGNDGEHAEVLVPQSDGGSQRMPLAELEALYSGTAVFAKCRYRPDGRVGDYASALPEHWFFGPLKRLWRSYAEVTAAALVANVLAVASALFAMQVYDRVVPNAAFDTLWILASGVALAIVLDGVLRIMRGHLLNVLGKRLDLQLSTLLFSRVLSTRVAA-KPASMGAFSTQVREFESVREFFTSSSAALISDLPFVAIFLLIIAVIGGHVVWVP-----LVACVLMILPGLLT---QRLLGHLSRQNLREGAMKNGVLLEAFEHLETVKATRAEGRCLHQWETLTGELAGTAMKTH----TLASTLSYSASIVQQLCYVGVVVFGVYRISEGAMTVGGLVACSILASRAIAPLSQAAGILGRWQHTKVAMEGLDQLM--SAEQE-RPQGKRFVHKERLQGHYRLEGVRLAHGDSPPVVDVQALNIRAGERVALLGGNGAGKSTLLRLLSGLLDAQAGRLLLDDVSLTQIDPADRQRGIGYLPQDVALFHGSLRDNLNLENAALGDEELLETLDGVGLGAFVRGHPLGLDMPI-QGNASLSGGQRQAVGLARVLLQDPPILLLDEPTAAFDQGSEKQVIDYLQQWLGKRTLVITTHKKSMLALVERAVVLRQGRVIMDGPLEQVVQGNQVQAPQAAEGGNHGL |
4RY2 Chain:A ((151-711)) | --------------------------------------------------------------------------------------------------------------------------------------------------GDYTQNMMVK-FAGFLKPLKKTVLCIFLASLLYTALGIAGSFYIKFLFDDLIKFEKLNDLHIISAGFAVIFLLQIFLNYYRSILVTKLGMSIDKSIMMEYYSHVLKLPMNFFNSRKVGEIISRFMDASKIRQAISGATLTIMIDT--------IMAVIGGILLYIQNSSLFFISFIIILLYGIIVTVFNKPIQNANRQIMEDNAKLTSALVESVKGIETIKSFGAE----EQTEKSTRDKIETVMKSSFKEGMLYINLSSLTGIVAGLGGIVILWAGAYNVIKGNMSGGQLLAFNALLAYFLTPVKNLIDLQPLIQTAVVASNRLGEILELATEKEL--------------GDIEFRNVDFRYGLRKPVLKNINLTIPKGKTVAIVGESGSGKTTLAKLLMNFYSPEKGDILINGHSIKNISLELIRKKIAFVSQDVFIFSGTVKENLCLGNENVDMDEIIKAAKMANAHDFIEKLPLKYDTFLNESGANLSEGQKQRLAIARALLKKPDILILDEATSNLDSITENHIKDAIYGLEDDVTVIIIAHRLSTIVNCDKIYLLKDGEIVESGSHTELIALKGCYFKMWKQTENT-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4RY2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -274710 for 3804 contacts (-72.2/contact) +
2D Compatibility (PS) -56538 + (NN) -29051 + (LL) 11996
1D Compatibility (HY) -47200 + (ID) 6950
Total energy: -402453.0 ( -105.80 by residue)
QMean score : 0.394
|
|
|