Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGRTVEDVDMLNHHFRVCSATVYRPPGDGCQSATSQPSAWWMAAKESRSGQLRRVEHVAFEGHPAAVLAGRAVEDRAVVGEADGQAEADVGSVLRGVQLAFEVQLEHARLDAFQADGDVRVVHGLAFAAALLGADGEGHGVSVHVLLQLAW-GRRRQRGGQTTGRRAGWPVLAAVGAARGLGIIRRRRSPTAHHQPTPEGMMKLPVLAVLGAALLLSACAKKEAEACASPDVKDQLMRIFLQGAITERSPEFKDSALRDVAILEKDPDSGVLSCVGTLSVPAGQQVVEGVLQYRIAPVAKSDYDYLLLDTAGANTTALAQRLNKALGQ |
| 4Q3K Chain:A ((20-260)) | QGMNISKIT-INQHVGVTLTCYVQDVSQEMSNMSKRPAMLIFPGGGYQFCSDREAEPIALSYLAKGY--------NAFVLRYSVKEHAVFPRPLIDAEDALSYLKDNAH--ALHINPDKIAVIGF--------------SAGGHLATTLATEGKVR-----PNAVVLGYPAL--------------IRHEKYWNFPTPKVDQQTPEMFVFHTF-------------------EDDLVPLSHPLYIVEELSK------------ANIPVEFHLFKSGVHGLSLGNKIVSNGLDKMIE------------DDVQVWFDLSCRWLDKVLDL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q3K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31876 for 2095 contacts (-15.2/contact) +
2D Compatibility (PS) -24725 + (NN) -2928 + (LL) 6372
1D Compatibility (HY) -5200 + (ID) 2350
Total energy: -60707.0 ( -28.98 by residue)
QMean score : 0.276
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