Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHDEREGYLEILSRITTEEEFFSLVLEICGNYGFEFFSFGARAPFPLTAPKYHFLSNYPGEWKSRYISEDYTSIDPIVRHGLLEYTPLIWNGEDFQENRFFWEEALHHGIRHGWSIPVRGKYGLISMLSLVRSSESIAATEILEKESFLLWITSMLQATFGDLLAPRIVPESNVRLTARETEMLKWTAVGKTYGEIGLILSIDQRTVKFHIVNAMRKLNSSNKAEATMKAYAIGLLN
3SZT Chain:A ((5-237))
----REGYLEILSRITTEEEFFSLVLEICGNYGFEFFSFGARAPFPLTAPKYHFLSNYPGEWKSRYISEDYTSIDPIVRHGLLEYTPLIWNGEDFQENRFFWEEALHHGIRHGWSIPVRGKYGLISMLSLVRSSESIAATEILEKESFLLWITSMLQATFGDLLAPRIVPESNVRLTARETEMLKWTAVGKTYGEIGLILSIDQRTVKFHIVNAMRKLNSSNKAEATMKAYAIGLLN
General information:
TITO was launched using:
RESULT:
Template:
3SZT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -147268 for 1813 contacts (-81.2/contact) +
2D Compatibility (PS) -25053 + (NN) -13432 + (LL) 280
1D Compatibility (HY) -36000 + (ID) 11650
Total energy: -233123.0 ( -128.58 by residue)
QMean score : 0.452
(partial model without unconserved sides chains):
PDB file :
Tito_3SZT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SZT-query.scw
PDB file :
Tito_Scwrl_3SZT.pdb
: