Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MREYQRLKGFTDNLELRRRNRATVEHYMRMKGAERLQRHSLFVEDGCAGNWTTESGEPLVFRGHESLRRLAEWLERCFPDWEWHNVRIFETEDPNHFWVECDGRGKALVPGYPQGY---CENHYIHSFELENGRIKRNREFMNPMQKLRALGIAVPQIKRDGIPT
3FF0 Chain:A ((6-162))
----AIPQGFEDAVELRRKNRETVVKYMNTKGQDRLRRHELFVEDGCGGLWTTDTGSPIVIRGKDKLAEHAVWSLKCFPDWEWYNIKVFETDDPNHFWVECDGHGKILFPGY---PEGYYENHFLHSFELDDGKIKRNREFMNVFQQLRALSIPVPQIKREGIP-
General information:
TITO was launched using:
RESULT:
Template:
3FF0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37062 for 1000 contacts (-37.1/contact) +
2D Compatibility (PS) -16686 + (NN) -6455 + (LL) 364
1D Compatibility (HY) -16400 + (ID) 4950
Total energy: -81189.0 ( -81.19 by residue)
QMean score : 0.566
(partial model without unconserved sides chains):
PDB file :
Tito_3FF0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FF0-query.scw
PDB file :
Tito_Scwrl_3FF0.pdb
: