Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMGVNANISESLTGTIEAPFPEFEAPPANPMEVLRNWLERARRYGVREPRALALATVDGQGRPSTRIVVIAELGERGVVFATHADSQKGRELAQNPWASGVLYWRESSQQIILNGRAERLPDERADAQWLSRPYQTHPMSIASRQSETLADIHALRAEARRLAETDGPLPRPPGYCLFELCLESVEFWGNGTERLHERLRYDRDEGGWKHRYLQP
1T9M Chain:B ((11-214))
-----------LTGTIEAPFPEFEAPPANPMEVLRNWLERARRYGVREPRALALATVDGQGRPSTRIVVIAELGERGVVFATHADSQKGRELAQNPWASGVLYWRESSQQIILNGRAERLPDERADAQWLSRPYQTHPMSIASRQSETLADIHALRAEARRLAETDGPLPRPPGYCLFELCLESVEFWGNGTERLHERLRYDRDEGGWKHRYLQP
General information:
TITO was launched using:
RESULT:
Template:
1T9M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54414 for 1470 contacts (-37.0/contact) +
2D Compatibility (PS) -22223 + (NN) -13598 + (LL) 672
1D Compatibility (HY) -23200 + (ID) 10200
Total energy: -122963.0 ( -83.65 by residue)
QMean score : 0.585
(partial model without unconserved sides chains):
PDB file :
Tito_1T9M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T9M-query.scw
PDB file :
Tito_Scwrl_1T9M.pdb
: