Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVIIALAALGLLMLAAYRGYSVILFAP----------LAALGA-VLLTDPSAVAPTFTGVFMEKMVGFIKLYFPVFLLGAVFGKLIELAGFSRSIVAAAIRLLGTRQAMLVIVLVCALLTYGGVSLFVVVFAVYPFAAEMFRQSDIPKRLIPATIALGAFSFTMDALPGTPQIQNIIPSTFFGTHAWAAPWLGTLGALFVFAVGMLYLRRQANKARRNGEGYGSDLRNEPETADDLRLPNPWLALSPLVLVGVANLLFTHWIPQWYGQVHTLQLAGMATPLQTEVGKLTAIWAVQAALLLGILLVLASGFAAIRSRLAEGTRSAVAGSLLAAMNTASEYGFGAVIASLPGFLVLADALKSIPNPLVNEAITVTLLAGITGSASGGMSIALAAMSDTFIAAANAAQIPLEVLHRVAAMASGGMDTLPHNGAVITLLAVTGLTHREAYKVIFGITLIKTLAVFFVIGLFYATGLV |
| 2ECO Chain:A ((74-116)) | --------GIGLAMIAASRGYRLILTMPAQMSEERKRVLKAFGAELVLTDPERRMLAAREEALRLKEELGAFMPDQFKNPANVRAHYETTGPELYEALEGRIDAFVYGSGTGGTITGVGRYLKERIPHVKVIAVEPARSNVLSGGKMGQHGFQGMGPGFIPENLDLSLLDGVIQVWEEDAFPLARRLAREEGLFLGMSSGGIVWAALQVARELGPGKRVACISPDGGWKYLSTPLYA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ECO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32710 for 156 contacts (-209.7/contact) +
2D Compatibility (PS) -3898 + (NN) -5373 + (LL) 19988
1D Compatibility (HY) -4000 + (ID) 950
Total energy: -26943.0 ( -172.71 by residue)
QMean score : 0.448
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