Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSIEIDSEQGVCSVEIEGSRHRAPVDSLRIGTDAEARLSVLYIDGKRLHISEEDAQRLVVAGAEDQRRHLMADD
1YWY Chain:A ((23-96))
MSIEIDSEQGVCSVEIEGSRHRAPVDSLRIGTDAEARLSVLYIDGKRLHISEEDAQRLVVAGAEDQRRHLMADD
General information:
TITO was launched using:
RESULT:
Template:
1YWY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40757 for 485 contacts (-84.0/contact) +
2D Compatibility (PS) -7834 + (NN) -1927 + (LL) 0
1D Compatibility (HY) -8800 + (ID) 3700
Total energy: -63018.0 ( -129.93 by residue)
QMean score : 0.604
(partial model without unconserved sides chains):
PDB file :
Tito_1YWY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1YWY-query.scw
PDB file :
Tito_Scwrl_1YWY.pdb
: