Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQRIVIVGGGVGGTMLANLLVVRLYPEILGGEVQVLLISDSPDHYYKPAFMYVAFEQFFLEDLKRP-QRSLLRPEVMFQLDRVDRFDFPRQELQTR----SGRRHGYDYLVIATGCVPAPERIEGLKEAGDHFYQYQPARRLAERLASLESGRVFI-------------TVSFPRTPNVPHQCGIAPVETTLMLDDYLRRRGVRERVEIVYTYPTTAQLLRNCLFLQRPTCEILPSLFEQRGIRFQRGFTLARVDPERRIAYSEEGDEQPFDLLMATPPIHAVDAVRECGLPQAAADEGWLPTNHETLQVYGVDRVYTLGDTVDLPVSKAGGACHNQAPVVASNIAAEIRLGKPCAIYDGRVQAVAQMGLNAGMPLWYDYRHDVKPTPPTKLGGLLRQGFNRGLYWAVARGML |
| 3H8L Chain:A ((2-341)) | -TKVLVLGGRFGALTAAYTL-----KRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEGTVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATELVKGWDKYGYSVCEPEFATKLREKLESFQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHVTVFSP--GEYLSD---LSPNSRKAVASIYNQLGIKLVHNFKIKEIREHEIV--DEKGNTIPADITILLPPYTGNPALKNS-TPDLVDDGGFIPTDLNMVSI-KYDNVYAVGDANSMTVPKLGYLAVMTGRIAAQHLAN--RLGVPTKV-------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H8L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -229947 for 2640 contacts (-87.1/contact) +
2D Compatibility (PS) -34151 + (NN) -8764 + (LL) 4860
1D Compatibility (HY) -18800 + (ID) 4100
Total energy: -290902.0 ( -110.19 by residue)
QMean score : 0.402
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