Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNAIPLEHGLALASVLFALGLVGLMVRRNILFVLMSLEVMMNAAALAFVVAGSRWGQPDGQVMFILVLSLAA--AEASIGLAILLQLYRRFHTLDIDAASEMRG
2YND Chain:A ((329-385))-----------------------LLAKRNNFDVFNALEVMQNKS----VFEDLKFGEGDGSLKYYLYNWKCASFAPAHVGIVLL--------------------


General information:
TITO was launched using:
RESULT:

Template: 2YND.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15090 for 226 contacts (-66.8/contact) +
2D Compatibility (PS) -5216 + (NN) 6902 + (LL) 4260
1D Compatibility (HY) -4800 + (ID) 950
Total energy: -14894.0 ( -65.90 by residue)
QMean score : -0.167

(partial model without unconserved sides chains):
PDB file : Tito_2YND.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YND-query.scw
PDB file : Tito_Scwrl_2YND.pdb: