Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQRILIVGAGFAGMWSALSAVRQLDRQGRDDVEVAVLAPQPELRIRPRFYEPDVQRMAAP-----LGELFAAVGVRFVQGSAQRIDVAGKRVEYRDAEGTLAQLDYDRLVLAAGSGVWRPAS--VAGI-DAAFDVDQLEDALRLEAHL-HALRDLPDSPARN---TVVVAGGGFTGIETATEMPARLRAILGE----KAALRVIVVDRGAAIGASMGADLSGLIAEASAELGVEWCLGRSVAAVDAEGVTLD-DGQR--IEAKTVVWTVGVRASTLTGQIPGERDAQGRLHVDRNLKVLGLDDVYATGDVARAATDDLGNHALMTCQHAIALGRSAGNNVAADLLGVEPIPYSQVKYVTCLDLGGWGAVFTEGWDRQVRFVREEGKKIKTEINGVWIYPPAADRAVALAAADPLIPVVA |
| 4NWZ Chain:A ((3-343)) | -KPSIVILGAGYGGIVAALGLQKRLNY---NEADITLVNKNDYHYITTELHQPAAGTMHHDQARVGIKELIDEKKIKFVKDTVVAIDREQQKVTLQNGE-----LHYDYLVVGLGS---EPETFGIEGLREHAFSINSINSVRIIRQHIEYQFAKFAAEPERTDYLTIVVGGAGFTGIEFVGELADRMPELCAEYDVDPKLVRIINVEAAPTVLPGFDPALVNYAMDVLGGKGVEFKIGTPIKRCTPEGVVIEVDGEEEEIKAATVVWTGGVRGNSIV-EKSGFETMRGRIKVDPYLRAPGHENIFIVGDCALIINEENNRPYPPTAQIAIQHGENVAANLAALIRGGSMTPFK------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4NWZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -218041 for 2633 contacts (-82.8/contact) +
2D Compatibility (PS) -35048 + (NN) -9300 + (LL) 5588
1D Compatibility (HY) -21200 + (ID) 4550
Total energy: -282551.0 ( -107.31 by residue)
QMean score : 0.445
|
|
|