Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSKNTICLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCLGLNGGPAFRHSEAFSFQVATDDQAETDRLWNAIVDNGGEESACGWCRDKWGISWQITPRVLSEAIASPDRAAARRAFEAMMTMGRIDIATIEKAFKG
1U69 Chain:A ((3-158))
--SKNTICLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCLGLNGGPAFRHSEAFSFQVATDDQAETDRLWNAIVDNGGEESACGWCRDKWGISWQITPRVLSEAIASPDRAAARRAFEAMMTMGRIDIATIEKAFK-
General information:
TITO was launched using:
RESULT:
Template:
1U69.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38707 for 1111 contacts (-34.8/contact) +
2D Compatibility (PS) -16546 + (NN) -8001 + (LL) 192
1D Compatibility (HY) 0 + (ID) 3050
Total energy: -66112.0 ( -59.51 by residue)
QMean score : 0.310
(partial model without unconserved sides chains):
PDB file :
Tito_1U69.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1U69-query.scw
PDB file :
Tito_Scwrl_1U69.pdb
: