Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKTWIYAASAAAIGGALIGGWLLDPAPPEASPQARQSPAAQAAAAPTAALAAPAADATRMLAPTPVTTPAPRERVTLWQGELRSREGAQGIPEYLAQVEPALLDTLALGQVLE-MSLPGRERPLQARLASTHNSAGLPVWRGGLVDGDEAESLTVVRGSLETHINVATLDGSYSIIVDNRSGKTRVIDENDIAARSDPHGDHVDAPLAELPPMPPPAQG |
1HVH Chain:A ((2-44)) | --------------------------------------------------------------------------QVTLWQRPLVTIKIG-------GQLKEALLDTGADDTVLEEMSLPGRWKP------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HVH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2045 for 166 contacts (12.3/contact) +
2D Compatibility (PS) -4095 + (NN) 1968 + (LL) 9268
1D Compatibility (HY) -3600 + (ID) 1150
Total energy: 4436.0 ( 26.72 by residue)
QMean score : 0.005
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