Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKILLLIPLAFAASLAWFVWLEPSPAPETAPPASPQAGADRAPPAASAGEAVPAPQVMPAKVAPLPTSFRGTSVDGSFSVDASGNLLITRDIRNLFDYFLSAVGEEPLQQSLDRLRAYIAAEL-QEPARGQALALMQQYIDYKKELVLLERDLP--RLADLDALRQREAAVKALRARIFSNEAHVAFFADEETYNQFTLERLAIRQDGKLSAEEKAAAIDRLRASLPEDQQESVL-PQLQSELQQQTAALQAAGAGPEAIRQMRQQLVGAEATTRLEQLDRQRSAWKGRLDDYFAEKSRIEGNTGLSEADRRAAVERLAEERFSEQ-ERLRLGALEQMRQAEQR |
| 2ES4 Chain:D ((53-332)) | -----------------------------------------------------------MPLPAALPGALAGSHA-PRLPLAAGGRLARTRAVREFFDYCLTAQGELTPAALDALVRREIAAQLDGSPAQAEALGVWRRYRAYFDALA------VLGDKLDPAAMQLALDQRAALADRTLGEW-AEPFFGDEQRRQRHDLERIRIANDT-LS--QKAARLAALDAQLTPDERAQQAALHAQQDAVTKIADLQKAGATPDQMRAQIAQTLGPEAAARAAQMQQDDEAWQTRYQAYAAERDRIAA-QGLAPQDRDARIAQLRQQTFTAPGEAIRAASLDRGAG---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ES4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31429 for 1645 contacts (-19.1/contact) +
2D Compatibility (PS) -30149 + (NN) -19737 + (LL) 5376
1D Compatibility (HY) -7600 + (ID) 4250
Total energy: -87789.0 ( -53.37 by residue)
QMean score : 0.685
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