Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSPSPVRILFVDDEERILRSLAMQFRRHYEVLTESDPRRALERLKTERIQVLVSDQRMPQMSGAELLAQARERYPETLRILLTGYSDLDAAVDALNDGGIFRYLTKPWNPQEMAFTLRQAAEIASRQGLPAPPAATLAAPLSVLLLDDDPETLDCVGAFCHAGGHRLLRARNLAEALVWLNTEPVEVLVSDLKLAGEHTAPLLKSLAQAHPRLLSLVVTPFRDTQALLELINQAQIFRYLPKPIRRGLFEKGLKAAAEQALLWRGRSLPEVDRLAEVPRDEREKERVGSLLGMLGRLRERLTA |
| 2JK1 Chain:A ((4-117)) | -------ILLVDDEPHSLAAMKLALEDDFDVLTAQGAEAAIAILEEEWVQVIICDQRMPGRTGVDFLTEVRERWPETVRIIITGYTDSASMMAAINDAGIHQFLTKPWHPEQLLSSARNAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JK1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66983 for 907 contacts (-73.9/contact) +
2D Compatibility (PS) -12665 + (NN) -11270 + (LL) 14240
1D Compatibility (HY) -10800 + (ID) 2400
Total energy: -89878.0 ( -99.09 by residue)
QMean score : 0.733
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