Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVLFVCLGNICRSPTAEGVFRRKVEEAGLASRIHVDSAGTAGWHVGKAPDQRTRLAAQRRGYDLSALRGRQVGIEDFSRHDLILAMDLSNLADLETLRAGRGAAELDLFLRRYGSERDEVPDPYYGGEEGFEQVLDLIEHACDRLLIEAKGRL
4LRQ Chain:D ((3-148))
-KVLVVCMGNICRSPTAEAVLRAKA--AQLKVDVEVDSAGTIGYHQGNPPDARSKAAGEKRGYSFSGIKARKIRDEDFVKFDWILAADQENLAELKARCPQSHQHKLSLMLSHSDSEYQEIPDPYYGGERGFELVLDLVEDAAEQFLLK-----
General information:
TITO was launched using:
RESULT:
Template:
4LRQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73062 for 1262 contacts (-57.9/contact) +
2D Compatibility (PS) -15666 + (NN) -5372 + (LL) 728
1D Compatibility (HY) -12000 + (ID) 3650
Total energy: -109022.0 ( -86.39 by residue)
QMean score : 0.467
(partial model without unconserved sides chains):
PDB file :
Tito_4LRQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LRQ-query.scw
PDB file :
Tito_Scwrl_4LRQ.pdb
: