Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRRLKRDPLERAFLRGYQNGITGKSRDLCPFTHPTTRQSWLNGWREGRGDNWDGLTGTAGLQRLNQLQHV
2JRM Chain:A ((1-60))
MKRQKRDRLERAQSQGYKAGLNGRSQEACPYQQVDARSYWLGGWRDARDEKQSGLYKLEH----------
General information:
TITO was launched using:
RESULT:
Template:
2JRM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3388 for 360 contacts (9.4/contact) +
2D Compatibility (PS) -5987 + (NN) 2093 + (LL) 1144
1D Compatibility (HY) -2000 + (ID) 1250
Total energy: -2612.0 ( -7.26 by residue)
QMean score : 0.078
(partial model without unconserved sides chains):
PDB file :
Tito_2JRM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JRM-query.scw
PDB file :
Tito_Scwrl_2JRM.pdb
: