Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTFNRVVCGKLSWFIQAGGSMPSLIMDIALSGERLQAIYGGRANRVLLRSRDGR--RVNLPAHHLRPFIGHDGVHGTFRLDFSEDGRLLALQRLA
3IUR Chain:A ((98-160))
---------------------------------------GLQNQNVLWRQQEGKPAEVFLDPNTLSP----DGTTALDQLSFSRDGRILA-----
General information:
TITO was launched using:
RESULT:
Template:
3IUR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2732 for 200 contacts (-13.7/contact) +
2D Compatibility (PS) -4927 + (NN) -3609 + (LL) 4016
1D Compatibility (HY) -3200 + (ID) 950
Total energy: -11402.0 ( -57.01 by residue)
QMean score : 0.036
(partial model without unconserved sides chains):
PDB file :
Tito_3IUR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IUR-query.scw
PDB file :
Tito_Scwrl_3IUR.pdb
: