Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRNVMLITGASRGIGAATALLAAERGYAVVLNYLRNREAAEALRQRIERQGGEALAVAADVAEEGDVERLFASIDERFGRLDVLVNNAGMLEAQTRLENIDAARLHRVFATNVTGSFLCAREAVKRLSTRHGGRGGSIVNVSSMASRLGSPNEYIDYAAAKGAIDSMTIGLAREVAAEGIRVNAVRPGLIDTEIHASGGEPGRIERLKGGIPLGRGGTAEEVARAILWLASDEASYSTGTFIDVSGGR
4IQG Chain:C ((25-271))
-SKVVLITGGSRGIGAASALLAARQGYAVAVNYASNSAAADEVVRQIREAGGQALAVQADVAKEREVLAMFETVDAQLGRLSALVNNAGVVDQTTRVDGITLERLQRMFEINVFGSFLCAREAVKRMSTRYGGSGGSIVNVSSAAARLGSPGQYVDYAAAKGAIDTFTLGLAKEVATEGIRVNAVRPGIIETDIHASGGLPNRARDVAPQVPMQRAGTAREVAEAIVWLLGDQASYTTGALLDVTGGR
General information:
TITO was launched using:
RESULT:
Template:
4IQG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117082 for 2196 contacts (-53.3/contact) +
2D Compatibility (PS) -27198 + (NN) -13277 + (LL) 208
1D Compatibility (HY) -24800 + (ID) 7650
Total energy: -189799.0 ( -86.43 by residue)
QMean score : 0.625
(partial model without unconserved sides chains):
PDB file :
Tito_4IQG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IQG-query.scw
PDB file :
Tito_Scwrl_4IQG.pdb
: