Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQFFQIHPENPQPRLVKQAVEIVRQGGVIVYPTDSSYALGCRIGEKTAVDRIRRIRQLDDKHNFTLVCRDLSELGVYAKVDTGLFRLLKAHTPGPYTFILSATREVPRMLLHPKRRTIGLRVPNCPIARALLEELGEPLMSVSLIMPGSGEPLNDPYEMRQVLEHQVDLIVDGGYGGGEASTVISLTDTDPEVIRVGCGDPAPFMQPA
1K7J Chain:A ((1-205))
MSQFFYIHPDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAMERICRIRQLPDGHNFTLMCRDLSELSTYSFVDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQEKRKTIGMRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEIKDRLEKQVDLIIHGGYLGQKPTTVIDLTDDTPVVVREGVGDVKPF----
General information:
TITO was launched using:
RESULT:
Template:
1K7J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -152769 for 1735 contacts (-88.1/contact) +
2D Compatibility (PS) -22467 + (NN) -16649 + (LL) 332
1D Compatibility (HY) -22400 + (ID) 6650
Total energy: -220603.0 ( -127.15 by residue)
QMean score : 0.706
(partial model without unconserved sides chains):
PDB file :
Tito_1K7J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1K7J-query.scw
PDB file :
Tito_Scwrl_1K7J.pdb
: