Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRVLVIESSARQRG-SVSRLLTAEFISHWKIAHPADRFQVRDLAREPLPHLDELLLGAWTTPCDGHSAAERRALERSNRLTEELRMADVLVLAAPMYNFAIPSSLKSWFDHVLRAGLTFRYAEQGPEGLLQGKRAFVLTARGGIYAGGGLDHQEPYLRQVLGFVGIHDVTFIHAEGMNMGPEFREKGLARARERMRQALETDTSLCVPLPTLR
1T5B Chain:A ((1-200))
MSKVLVLKSSILA-GYSQSGQLTDYFIEQWREKHVADEITVRDLAANPVPVLDGELVGAMR--DAPLTPRQQDALALSDELIAELKAHDVIVIAAPMYNFNIPTQLKNYFDLIARAGITFRYTEKGPEGLVTGKRAVVLSSRGGIHKDTPTDLIAPYLKVFLGFIGITDVNFVFAEGIAYGPEVAAKAQADAKAAIDSVVA-------------
General information:
TITO was launched using:
RESULT:
Template:
1T5B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121205 for 1529 contacts (-79.3/contact) +
2D Compatibility (PS) -21800 + (NN) -11798 + (LL) 660
1D Compatibility (HY) -18400 + (ID) 4800
Total energy: -177343.0 ( -115.99 by residue)
QMean score : 0.635
(partial model without unconserved sides chains):
PDB file :
Tito_1T5B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T5B-query.scw
PDB file :
Tito_Scwrl_1T5B.pdb
: