Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRRAPMFKPLPITLQRGALRLEPLVEADIPELVSLAEANREALQYMDGPTRPDWYRQSLAEQREGRALPLAVRLGVQLVGTTRFAEFLPALPACEIGWTWLDQAQHGSGLNRMIKYLMLKHAFDNLRMVRVQLSTAASNLRAQGAIDKLGAQREGVLRNHRRLAGGRLDDTFVYSITDHEWPQVKAALEASFTG
1YRE Chain:D ((10-196))
-------FKPLPITLQRGALRLEPLVEADIPELVSLAEANREALQYMDGPTRPDWYRQSLAEQREGRALPLAVRLGVQLVGTTRFAEFLPALPACEIGWTWLDQAQHGSGLNRMIKYLMLKHAFDNLRMVRVQLSTAASNLRAQGAIDKLGAQREGVLRNHRRLAGGRLDDTFVYSITDHEWPQVKAALEASFT-
General information:
TITO was launched using:
RESULT:
Template:
1YRE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92628 for 1442 contacts (-64.2/contact) +
2D Compatibility (PS) -20188 + (NN) -6665 + (LL) 420
1D Compatibility (HY) -24800 + (ID) 9350
Total energy: -153211.0 ( -106.25 by residue)
QMean score : 0.509
(partial model without unconserved sides chains):
PDB file :
Tito_1YRE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1YRE-query.scw
PDB file :
Tito_Scwrl_1YRE.pdb
: