Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQNRMMITGAGSGLGREIALRWARDGWRLALADVNEAGLAESLKLVREAGGDGFTQRCDVRDYSQLTALAQSCEEKFGGIDVIVNNAGVASGGFFGELSLEDWDWQIAINLIGVVKGCKAFLP-LLER-SKGKIVNIASMAALMQGPAMSNYNVAKAGVVALSESLLVELALVEVGVHVVCPSFFQTNLL---DSFRGPSPEMKHQVGKLLESSPISAADIADYIHAEVAKGSFLILPHEQARMAWRIKQQNPQAIYDEMTAMAGKMQAKRQRQA
3TJR Chain:A ((35-296))
-----VVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIR-----------------SVSADDVARLTADAILANRLYILPHAAARESIRRRFERIDRTFDEQAA-------------
General information:
TITO was launched using:
RESULT:
Template:
3TJR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -159013 for 1970 contacts (-80.7/contact) +
2D Compatibility (PS) -25065 + (NN) -5147 + (LL) 2464
1D Compatibility (HY) -18800 + (ID) 4250
Total energy: -209811.0 ( -106.50 by residue)
QMean score : 0.550
(partial model without unconserved sides chains):
PDB file :
Tito_3TJR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TJR-query.scw
PDB file :
Tito_Scwrl_3TJR.pdb
: