Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNDMEDHLLTVLSVASGVPKEEISRDSRMEDLAFDSLVVSELSLKLRKEFGVTGVDDELDLLETVDELFQLVEKHRAA
2LTE Chain:A ((23-101))
MPNDMEDHLLTVLSVASGVPKEEISRDSRMEDLAFDSLVVSELSLKLRKEFGVTGVDDELDLLETVDELFQLVEKHRAA
General information:
TITO was launched using:
RESULT:
Template:
2LTE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36892 for 515 contacts (-71.6/contact) +
2D Compatibility (PS) -8408 + (NN) -7215 + (LL) 0
1D Compatibility (HY) -11600 + (ID) 3950
Total energy: -68065.0 ( -132.17 by residue)
QMean score : 0.824
(partial model without unconserved sides chains):
PDB file :
Tito_2LTE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LTE-query.scw
PDB file :
Tito_Scwrl_2LTE.pdb
: