Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTAKPEIVITYCTQCQWLLRAAWLAQELLSTFADDLGKVCLEPGTGGVFRITCDGVQVWERKADGGFPEAKALKQRVRDRIDPQRDLGHNDRPSR
2OKA Chain:A ((4-87))
---AKPEIVITYCTQCQWLLRAAWLAQELLSTFADDLGKVCLEPGTGGVFRITCDGVQVWERKADGGFPEAKALKQRVRDRIDPQRD---------
General information:
TITO was launched using:
RESULT:
Template:
2OKA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56381 for 577 contacts (-97.7/contact) +
2D Compatibility (PS) -9734 + (NN) -10281 + (LL) 44
1D Compatibility (HY) -11600 + (ID) 4200
Total energy: -92152.0 ( -159.71 by residue)
QMean score : 0.677
(partial model without unconserved sides chains):
PDB file :
Tito_2OKA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OKA-query.scw
PDB file :
Tito_Scwrl_2OKA.pdb
: