Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MLIPHDLLEADTLNNLLEDFVTREGTDNGDETPLDVRVERARHALRRGEAVILFDPESQQCQLMLRSEVPAELLRD
1Y0N Chain:A ((1-78))
GHMLIPHDLLEADTLNNLLEDFVTRE-------TPLDVRVERARHALRRGEAVILFDPESQQCQLMLRSEVPAELLRD
General information:
TITO was launched using:
RESULT:
Template:
1Y0N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50891 for 422 contacts (-120.6/contact) +
2D Compatibility (PS) -7344 + (NN) -4902 + (LL) -420
1D Compatibility (HY) -10000 + (ID) 3450
Total energy: -77007.0 ( -182.48 by residue)
QMean score : 0.812
(partial model without unconserved sides chains):
PDB file :
Tito_1Y0N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y0N-query.scw
PDB file :
Tito_Scwrl_1Y0N.pdb
: