Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTAVRRIRAAALPDLPDASWSNALLVGEELVMSGMTAHPATRQAAERGAALDAHAQALVVLGKVKALLEAAGGHVGNLYKLNVYVTRIADKDAIGRARQEFFAG-QGTFPASTLVEVSGLVFPELLVEIDAWARLDIDLANCDEA
2IG8 Chain:A ((1-142))
MTAVRRIRAAALPDLPDASWSNALLVGEELVMSGMTAHPATRQAAERGAALDAHAQALVVLGKVKALLEAAGGHVGNLYKLNVYVTRIADKDAIGRARQEFFAGQG-TFPASTLVEVSGLVFPELLVEIDAWARLDIDLANCD--
General information:
TITO was launched using:
RESULT:
Template:
2IG8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90983 for 1052 contacts (-86.5/contact) +
2D Compatibility (PS) -15037 + (NN) -2982 + (LL) 76
1D Compatibility (HY) -19200 + (ID) 7000
Total energy: -135126.0 ( -128.45 by residue)
QMean score : 0.534
(partial model without unconserved sides chains):
PDB file :
Tito_2IG8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IG8-query.scw
PDB file :
Tito_Scwrl_2IG8.pdb
: