Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFSFHIPNMTCGGCAKTVTRILHGVDPQARVETDPPRREARVESTLDKHAFLEALSEAGYPEGR
2XMT Chain:A ((3-61))
-IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGH----
General information:
TITO was launched using:
RESULT:
Template:
2XMT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43108 for 412 contacts (-104.6/contact) +
2D Compatibility (PS) -6088 + (NN) -4220 + (LL) 100
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -57716.0 ( -140.09 by residue)
QMean score : 0.734
(partial model without unconserved sides chains):
PDB file :
Tito_2XMT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XMT-query.scw
PDB file :
Tito_Scwrl_2XMT.pdb
: