Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEDNFDDEFDGSLPSGPRHPMARRFRGYLPVVVDVETGGFNSATDALLEIAATTVGMDEKGFLFPEHTYFFRIEPFEGANIEPAALEFTGIKLDHPLRMAVQEEAALTEIFRGIRKALKANGCKRAILVGHNSSFDLGFLNAAVARTGIKRNPFHPFSSFDTATLAGLAYGQTVLAKACQAAGMEFDNREAHSARYDTEKTAELFCGIVNRWKEMGGWMDDDD
2F96 Chain:A ((19-220))
------------------RHPMARRFRGYLPVVVDVETGGFNSATDALLEIAATTVGMDEKGFLFPEHTYFFRIEPFEGANIEPAALEFTGIKLDHPLRMAVQEEAALTEIFRGIRKALKANGCKRAILVGHNSSFDLGFLNAAVARTGIKRNPFHPFSSFDTATLAGLAYGQTVLAKACQAAGMEFDNREAHSARYDTEKTAELFCGIVNRWKEMGGWM----
General information:
TITO was launched using:
RESULT:
Template:
2F96.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99692 for 1637 contacts (-60.9/contact) +
2D Compatibility (PS) -22128 + (NN) -11351 + (LL) -540
1D Compatibility (HY) -26400 + (ID) 10050
Total energy: -170161.0 ( -103.95 by residue)
QMean score : 0.603
(partial model without unconserved sides chains):
PDB file :
Tito_2F96.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F96-query.scw
PDB file :
Tito_Scwrl_2F96.pdb
: