Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNILVRPSQTPKGQCWQVCLDQQAVNFR--SESEARRFVDRLEARLRAPHVLPELKQRTA
1HYW Chain:A ((25-58))
----------------TVQKDGRRVEFTATSVSDLKKYIAELEVQTGMTQ----------
General information:
TITO was launched using:
RESULT:
Template:
1HYW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7966 for 129 contacts (-61.8/contact) +
2D Compatibility (PS) -3452 + (NN) -1331 + (LL) 1876
1D Compatibility (HY) -1200 + (ID) 400
Total energy: -12473.0 ( -96.69 by residue)
QMean score : 0.773
(partial model without unconserved sides chains):
PDB file :
Tito_1HYW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYW-query.scw
PDB file :
Tito_Scwrl_1HYW.pdb
: