Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEVPENMQEFIELNSELAEVWPNITEKKDALPDAEEWDGVAGKLQHLER
1FF2 Chain:A ((1-106))
-AFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDDALCEPECPAQAIFSEDEVPEDMQEFIQLNAELAEVWPNITEKKDPLPDAEDWDGVKGKLQHLER
General information:
TITO was launched using:
RESULT:
Template:
1FF2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83497 for 815 contacts (-102.5/contact) +
2D Compatibility (PS) -11401 + (NN) -8974 + (LL) 208
1D Compatibility (HY) -15600 + (ID) 4900
Total energy: -124164.0 ( -152.35 by residue)
QMean score : 0.603
(partial model without unconserved sides chains):
PDB file :
Tito_1FF2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FF2-query.scw
PDB file :
Tito_Scwrl_1FF2.pdb
: