Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIGHGYDVHRFGEGDFITLGGVRIPHKHGLVAHSDGDVLLHALSDALLGAAALGDIGKHFPDTDPRFKGADSRALLRHVVAIVAEKGWKVGNVDATIVAQAPKMAPHIETMRGLIAEDLGVAVDQVNVKATTTERLGFTGREEGIAVHAVALLMAR
5B8F Chain:B ((8-164))
MRIGHGYDVHRFGEGDFITLGGVRIPHKHGLVAHSDGDVLLHALSDALLGAAALGDIGKHFPDTDPRFKGADSRALLRHVVAIVAEKGWKVGNVDATIVAQAPKMAPHIETMRGLIAEDLGVAVDQVNVKATTTERLGFTGREEGIAVHAVALLMAR
General information:
TITO was launched using:
RESULT:
Template:
5B8F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118798 for 1327 contacts (-89.5/contact) +
2D Compatibility (PS) -17562 + (NN) -13369 + (LL) 0
1D Compatibility (HY) -20400 + (ID) 7850
Total energy: -177979.0 ( -134.12 by residue)
QMean score : 0.557
(partial model without unconserved sides chains):
PDB file :
Tito_5B8F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5B8F-query.scw
PDB file :
Tito_Scwrl_5B8F.pdb
: