Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNPVLPEQAQEALDAFGHTASWEQRARLLLQWGERLAPLAEHERQEEHRVHGCESLVWLLGEQR-DGHWRFRADSDARLIRGLLAVLLARVDGIETRELARLDLNDWFTCLGLSRQLSPSRSNGLNAVLQRMRELAGQTAG
3G0M Chain:A ((7-138))
----LPDK-EKLLRNFTRCANWEEKYLYIIELGQRLAELNPQDRNPQNTIHGCQSQVWIVMRRNANGIIELQGDSDAAIVKGLMAVVFILYHQMTAQDIVHFDVRPWFEKMALAQHLTPSRSQGLEAMIRAIRAKAA----
General information:
TITO was launched using:
RESULT:
Template:
3G0M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92724 for 980 contacts (-94.6/contact) +
2D Compatibility (PS) -13997 + (NN) -6967 + (LL) 468
1D Compatibility (HY) -14400 + (ID) 2100
Total energy: -129720.0 ( -132.37 by residue)
QMean score : 0.721
(partial model without unconserved sides chains):
PDB file :
Tito_3G0M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G0M-query.scw
PDB file :
Tito_Scwrl_3G0M.pdb
: