Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMIETRNLGKRFGSRVAVDDLSFQVETGEVLGFLGPNGAGKSTTMKMLTGFLAPCAGTASIFGFDIRNRTLQAQRLIGYLPEGSPCYAEMTVQGFLDFIAEIRGYRGAGKRERVARALGLLELDEVRRQTIETLSKGFRRRVGLAQAILHEPRALVLDEPTDGLDPNQKHQVRELIRGLAQERI-VIISTHILEEVSALCSRALVIGGGRLLADSTPLELASRSRYHQAVTLYSDEPLDAVALAVLPGVAGIEENPAEGSLTVLAQPGAVIFPQVSGLVAERGWRIRELDVERGRLDEVFRNLTRGTEA
1VPL Chain:A ((18-248))---VKDLRKRIGKKEILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGIVTVFGKNVVEEPHEVRKLISYLPEEAGAYRNMQGIEYLRFVAGFYASSSSEIEEMVERATEIAGLGEKIKDRVSTYSKGMVRKLLIARALMVNPRLAILDEPTSGLDVLNAREVRKILKQASQEGLTILVSSHNMLEVEFLCDRIALIHNGTIVETGTVEELKERYKAQNIEEVFEE--------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1VPL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -154549 for 1883 contacts (-82.1/contact) +
2D Compatibility (PS) -24528 + (NN) -7750 + (LL) 5668
1D Compatibility (HY) -17200 + (ID) 3700
Total energy: -202059.0 ( -107.31 by residue)
QMean score : 0.521

(partial model without unconserved sides chains):
PDB file : Tito_1VPL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VPL-query.scw
PDB file : Tito_Scwrl_1VPL.pdb: