Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTLLALDTSTEACSVALLHEGRALSHYEVIPRLHAQRLLPMVRDLLDEAGVALSAVDAIAFGRGPGAFTGVRIAIGVVQGLAFALQRPVLAVSDLAILAQRAYREQGAERVAAAIDARMDEVYWGCYQLQQGEMRLAGSEAVLPPERVAVPWDAAAADWFGAGTGWGYVERMPQRPVALDASLLPHAEDLLSLAGFAWARGEGVEAEQALPVYLRDNVATPKKAP
5BR9 Chain:A ((9-224))
MSTLLALDTSTEACSVALLHEGRALSHYEVIPRLHAQRLLPMVRDLLDEAGVALSAVDAIAFGRGPGAFTGVRIAIGVVQGLAFALQRPVLAVSDLAILAQRAYREQGAERVAAAIDARMDEVYWGCYQLQQGEMRLAGSEAVLPPERVAVPWDAAAADWFGAGTGWGYVERMPQRPVALDASLLPHAEDLLSLAGFAWARGEGVEAEQALPVYLR----------
General information:
TITO was launched using:
RESULT:
Template:
5BR9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -185872 for 1889 contacts (-98.4/contact) +
2D Compatibility (PS) -22504 + (NN) -4968 + (LL) 224
1D Compatibility (HY) -30400 + (ID) 10800
Total energy: -254320.0 ( -134.63 by residue)
QMean score : 0.442
(partial model without unconserved sides chains):
PDB file :
Tito_5BR9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5BR9-query.scw
PDB file :
Tito_Scwrl_5BR9.pdb
: