Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSNRYPLPAQTGLVVAPGLPPKNSTLRPDQLNKRLSSAWHHLYDLCPELLKIDPPDGLTILRGFLQWAAEQKAAWNWAMHLRLYCWLLQSPFGAKVTDEHLEVLMDASAARWTVDDTSANRGILLASQGGAHITQDWKAPQAGAGTRVPLERLDLPAPNWTFAYCAVPDPRLREFPGWKPLPARGSLVG |
| 2PMZ Chain:B ((163-243)) | -----------------------------------------------------------------------------------------------------------------TQEDLAPNRVLVDTGKTGSNITHTAKIISSTAGYRVPVTIERLKDGTFHVSFPAVP--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PMZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1970 for 272 contacts (7.2/contact) +
2D Compatibility (PS) -5774 + (NN) 467 + (LL) 7936
1D Compatibility (HY) -2000 + (ID) 850
Total energy: 1749.0 ( 6.43 by residue)
QMean score : 0.065
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